You can easily copy files from one directory to another. You can easily create cmd-file with the command XCOPY and it's keys and make copies of files.

xcopy c:\dir1\*.* d:\ /O/X/E/H/K 

In this command data will be copied from c:\ to D:\, even folders and system files as well. Here's what the flags do:

/E - Copies folders and subfolders, including empty ones. 
/H - Copies hidden and system files also. 
/K - Copies attributes. Typically, Xcopy resets read-only attributes.
/O - Copies file ownership and ACL information.
/X - Copies file audit settings (implies /O).